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Journal of Heredity Advance Access originally published online on June 9, 2008
Journal of Heredity 2008 99(6):696-698; doi:10.1093/jhered/esn044
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© The American Genetic Association. 2008. All rights reserved. For permissions, please email: journals.permissions@oxfordjournals.org.

Computer Notes

Mining the Bovine Genome with the "Bovine SNP Retriever"

Francesca Panzitta*, Andrea Caprera*, Ivan Merelli, Luciano Milanesi, John L. Williams, Barbara Lazzari, and Alessandra Stella

From the Parco Tecnologico Padano, Via Einstein—Località Cascina Codazza, 26900 Lodi, Italy (Panzitta, Caprera, Williams, Lazzari, and Stella); and the National Research Council (CNR), Istituto Tecnologie Biomediche, Via Fratelli Cervi 93, 20090 Segrate (MI), Italy (Merelli and Milanesi)

Address correspondence to B. Lazzari at the address above, or e-mail: barbara.lazzari{at}tecnoparco.org.

Online resources for the bovine genome analysis are provided at the most important Web sites. Nonetheless, retrieval of single-nucleotide polymorphism (SNP)–related information is not always easy when searches must focus on complementary features. In this work, we present the Bovine SNP Retriever: a user-friendly tool for bovine SNP retrieval that also facilities the retrieval of SNP-related information within user-selected quantitative traits loci regions and reverse electronic polymerase chain reaction analysis on the bovine genome. The Bovine SNP Retriever is available at http://www.itb.cnr.it/ptp/bovine_snp_retriever/.

* These authors contributed equally to this work.

Corresponding Editor: James E. Womack

Received January 10, 2008
Accepted April 24, 2008


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